Volume 16 Issue 3
Jun.  2020
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SHANGGUAN Qing, CHEN Kunci, LIU Haiyang, OU Mi, LUO Qing, WANG Yakun, XU Shengyun, ZHAO Jian. Characteristics of micorsatellites and genetic structure of wild Channa maculata[J]. South China Fisheries Science, 2020, 16(3): 47-60. DOI: 10.12131/20190200
Citation: SHANGGUAN Qing, CHEN Kunci, LIU Haiyang, OU Mi, LUO Qing, WANG Yakun, XU Shengyun, ZHAO Jian. Characteristics of micorsatellites and genetic structure of wild Channa maculata[J]. South China Fisheries Science, 2020, 16(3): 47-60. DOI: 10.12131/20190200
shu

Characteristics of micorsatellites and genetic structure of wild Channa maculata

  • 1.

    Pearl River Fisheries Research Institute, Chinese Academy of Fishery Sciences/Key Laboratory of Tropical & Subtropical Fishery Resource Application & Cultivation of Ministry of Agriculture and Rural Affairs, Guangzhou 510380, China

  • 2.

    College of Fisheries and Life Science, Shanghai Ocean University, Shanghai 201306, China

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  • Received Date: October 10, 2019
  • Revised Date: December 11, 2019
  • Accepted Date: January 09, 2020
  • Available Online: April 07, 2021
    Graphical Abstract
    • Abstract

  • Channa maculata is not only an indigenous economic fish in South China but also a parent species of cultured hybrid snakehead. Escape of the bred individuals may have impacts on wild populations, which makes genetic background analysis of wild resources an urgently need. This study analyzed the distribution characteristics of microsatellite markers in genome of C. maculata, and developed 20 polymorphic loci to analyze the genetic diversity and genetic structure of six wild populations named as Guangzhou, Huazhou, Jianghua, Nanning, Yangjiang and Shaowu populations. The results show that the number of alleles (Na) of the six wild populations was 3−28; the number of effective alleles (Ne) was 1.28−14.88; the observed heterozygosity (Ho) was 0.10−1.00; the expected heterozygosity (He) was 0.14−0.95; the polymorphic information content (PIC) was 0.13−0.95. The UPGAM dendrogram indicates that the genetic relationship between Huazhou and Fujian populations was the closest, but that  between Huazhou and Jianghua populations was the farthest. This study provides basis for the conservation and management of germplasm resources of C. maculata.

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