Citation: | DONG Zaijie, LIU Nian, FU Jianjun, ZHU Wenbin, WANG Lanmei, SU Shengyan. Genetic analysis for six wild and selection populations of common carp (Cyprinus carpio) using microsatellites[J]. South China Fisheries Science, 2018, 14(4): 46-55. DOI: 10.3969/j.issn.2095-0780.2018.04.006 |
[1] |
HULAK M, KASPAR V, KOHLMANN K, et al. Microsatellite-based genetic diversity and differentiation of foreign common carp (Cyprinus carpio) strains farmed in the Czech Republic[J]. Aquaculture, 2010, 298(3/4): 194-201.
|
[2] |
REN W, HU L, GUO L, et al. Preservation of the genetic diversity of a local common carp in the agricultural heritage rice-fish system[J]. Proc Natl Acad Sci USA, 2018, 115(3): E546-E554.
|
[3] |
董在杰, 刘念, 朱文彬, 等. 清水江鲤基于微卫星标记和形态指标的遗传分析[J]. 南方水产科学, 2018, 14(1): 1-8.
|
[4] |
XIAO T, LU C, XU Y, et al. Screening of SSR markers associated with scale cover pattern and mapped to a genetic linkage map of common carp (Cyprinus carpio L.)[J]. J Appl Genet, 2015, 56(2): 261-269.
|
[5] |
刘伟, 苏胜彦, 董在杰, 等. 3个鲤群体的微卫星标记与生长性状相关性分析[J]. 南方水产科学, 2012, 8(3): 17-24.
|
[6] |
ZHENG X, KUANG Y, LV W, et al. Quantitative trait loci for morphometric traits in multiple families of common carp (Cyprinus carpio)[J]. Sci China Life Sci, 2017, 60(3): 287-297.
|
[7] |
常玉梅, 孙效文, 梁利群. 中国鲤几个代表种群基因组DNA遗传多样性分析[J]. 水产学报, 2004, 28(5): 481-486.
|
[8] |
全迎春, 孙效文, 梁利群. 应用微卫星多态分析四个鲤鱼群体的遗传多样性[J]. 动物学研究, 2005, 26(6): 595-602.
|
[9] |
XU L H, WANG C H, WANG J, et al. Selection pressures have driven population differentiation of domesticated and wild common carp (Cyprinus carpio L.)[J]. Genet Mol Res, 2012, 11(3): 3222-3235.
|
[10] |
LIAO X L, YU X M, TONG J O. Genetic diversity of common carp from two largest Chinese lakes and the Yangtze River revealed by microsatellite markers[J]. Hydrobiologia, 2006, 568(1): 445-453.
|
[11] |
LI D, KANG D, YIN Q, et al. Microsatellite DNA marker analysis of genetic diversity in wild common carp (Cyprinus carpio L.) populations[J]. J Genet Genom, 2007, 34(11): 984-993.
|
[12] |
鲁翠云, 张晓丽, 顾颖, 等. 福瑞鲤与豫选黄河鲤选育群体的遗传结构及亲本间遗传距离分布[J]. 中国水产科学, 2016, 23(5): 1091-1098.
|
[13] |
桑滨, 鲁翠云, 李超, 等. 微卫星标记分析3个耐寒鲤品种的遗传多样性[J]. 生物学杂志, 2017, 34(3): 24-32,56.
|
[14] |
董在杰. 福瑞鲤选育技术和养殖对比试验[J]. 科学养鱼, 2011(6): 41-42.
|
[15] |
石连玉, 李池陶, 葛彦龙, 等. 黑龙江水产研究所鲤育种概要[J]. 水产学杂志, 2016, 29(3): 1-8.
|
[16] |
单云晶, 鲁翠云, 李超, 等. 基于线粒体COI基因序列的5种鲤养殖品种遗传多样性研究[J]. 中国水产科学, 2013, 20(5): 931-938.
|
[17] |
刘念, 傅建军, 董在杰, 等. 中国6个鲤群体的mtDNA D-loop序列遗传变异分析[J]. 水生态学杂志, 2017, 38(3): 75-82.
|
[18] |
DAVID L, RAJASEKARAN P, FANG J, et al. Polymorphism in ornamental and common carp strains (Cyprinus carpio L.) as revealed by AFLP analysis and a new set of microsatellite markers[J]. Mol Genet Genom, 2001, 266(3): 353-362.
|
[19] |
CROOIJMANS R P M A, van der POEL J J, GROENEN M, et al. Microsatellite markers in common carp (Cyprinus carpio L.)[J]. Anim Genet, 1997, 28(2): 129-134.
|
[20] |
孙效文, 贾智英, 魏东旺, 等. 磁珠富集法与小片段克隆法筛选鲤微卫星的比较研究[J]. 中国水产科学, 2005, 12(2): 126-132.
|
[21] |
NEI M. Estimation of average heterozygosity and genetic distance from a small number of individuals[J]. Genetics, 1978, 89(3): 583-590.
|
[22] |
KALINOWSKI S T, TAPER M L, MARSHALL T C. Revising how the computer program CERVUS accommodates genotyping error increases success in paternity assignment[J]. Mol Ecol, 2007, 16(5): 1099-1106.
|
[23] |
FOLL M, GAGGIOTTI O. A genome-scan method to identify selected loci appropriate for both dominant and codominant markers: a Bayesian perspective[J]. Genetics, 2008, 180(2): 977-993.
|
[24] |
JEFFREY H. Some tests of significance, treated by the theory of probability[J]. Math Proc Cambridge Philos Soc, 1935, 31(2): 203-222.
|
[25] |
EXCOFFIER L, LISCHER H E. Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows[J]. Mol Ecol Resour, 2010, 10(3): 564-567.
|
[26] |
TAMURA K, PETERSON D, PETERSON N, et al. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods[J]. Mol Biol Evol, 2011, 28(10): 2731-2739.
|
[27] |
PEAKALL R, SMOUSE P E. GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research[J]. Mol Ecol Notes, 2006, 6(1): 288-295.
|
[28] |
PRITCHARD J K, STEPHENS M, DONNELLY P. Inference of population structure using multilocus genotype data[J]. Genetics, 2000, 155(2): 945-959.
|
[29] |
EVANNO G, REGNAUT S, GOUDET J. Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study[J]. Mol Ecol, 2005, 14(8): 2611-2620.
|
[30] |
BALLOUX F, LUGON-MOULIN N. The estimation of population differentiation with microsatellite markers[J]. Mol Ecol, 2002, 11(2): 155-165.
|
[31] |
BOTSTEIN D, WHITE R L, SKOLNICK M, et al. Construction of a genetic linkage map in man using restriction fragment length polymorphisms[J]. Am J Hum Genet, 1980, 32(3): 314-331.
|
[32] |
高雅, 李生斌. STR遗传多态性研究中样本数量对等位基因检出数量的影响[J]. 遗传, 2008, 30(3): 313-320.
|
[33] |
傅建军, 李家乐, 沈玉帮, 等. 草鱼野生群体遗传变异的微卫星分析[J]. 遗传, 2013, 35(2): 192-201.
|
[34] |
LIU F, XIA J H, BAI Z Y, et al. High genetic diversity and substantial population differentiation in grass carp (Ctenopharyngodon idella) revealed by microsatellite analysis[J]. Aquaculture, 2009, 297(1/2/3/4): 51-56.
|
[35] |
朱冰, 樊佳佳, 白俊杰, 等. 金草鱼与中国4个草鱼群体的微卫星多态性比较分析[J]. 南方水产科学, 2017, 13(2): 51-58.
|
[36] |
刘青, 刘皓, 吴旭干, 等. 长江、黄河和辽河水系中华绒螯蟹野生和养殖群体遗传变异的微卫星分析[J]. 海洋与湖沼, 2015, 46(4): 958-968.
|
[37] |
DANISH M, SINGH I J. Genetic diversity analysis of common carp (Cyprinus carpio var. communis) and Labeo rohita (Hamilton, 1822) collected from hatchery by using microsatellite markers[J]. Int J Chem Stud, 2017, 5(3): 513-518.
|
[38] |
SINGH E, SHARMA O P, JAIN H K, et al. Microsatellite based genetic diversity and differentiation of common carp, Cyprinus carpio in Rajasthan (India)[J]. Nat Acad Sci Lett, 2015, 38(3): 193-196.
|
[39] |
古珍珍, 杨新鑫, 胡建尊, 等. 瓯江彩鲤酪氨酸酶(TYR)基因的选择压力分析[J]. 上海海洋大学学报, 2016, 25(3): 329-336.
|
[40] |
LEHOCZKY I, MAGYARY I, HANCZ C, et al. Preliminary studies on the genetic variability of six Hungarian common carp strains using microsatellite DNA markers[J]. Hydrobiologia, 2005, 533(1/2/3): 223-228.
|
[41] |
曲疆奇, 毕滢佳, 董在杰, 等. 应用SRAP标记分析福瑞鲤及其原始亲本的遗传结构[J]. 动物学杂志, 2011, 46(5): 120-125.
|
[42] |
KOHLMANN K, KERSTEN P, FLAJSHANS M. Microsatellite-based genetic variability and differentiation of domesticated, wild and feral common carp (Cyprinus carpio L.) populations[J]. Aquaculture, 2005, 247(1/2/3/4): 253-266.
|
[43] |
岳兴建, 邹远超, 王永明, 等. 元江鲤种群遗传多样性[J]. 生态学报, 2013, 33(13): 4068-4077.
|
[44] |
张倩倩, 陈杰, 蒋霞云, 等. 不同鳊鲂鱼类群体微卫星DNA指纹图谱的构建和遗传结构分析[J]. 水产学报, 2014, 38(1): 15-22.
|
[45] |
杨慧荣, 欧阳徘徊, 李桂峰, 等. 用微卫星技术研究珠江流域三个野生大眼鳜群体的遗传多样性[J]. 中山大学学报(自然科学版), 2015, 54(1): 103-109.
|
[46] |
唐首杰, 毕详, 王成辉, 等. 团头鲂3个选育群体遗传潜力的微卫星分析[J]. 南方水产科学, 2017, 13(2): 59-68.
|
[47] |
唐首杰, 杨洁, 王成辉, 等. 驯养、选育条件下尼罗罗非鱼群体的选择压力分析[J]. 中国水产科学, 2016, 23(4): 900-913.
|