Volume 8 Issue 3
Jun.  2012
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LIU Wei, SU Shengyan, DONG Zaijie, ZHANG Jianqiao, MA Liangxiao, LI Lingling, QV Jiangqi, YUAN Xinhua. Correlation analysis of microsatellite DNA markers with growth trait among 3 breeding populations of common carp[J]. South China Fisheries Science, 2012, 8(3): 17-24. DOI: 10.3969/j.issn.2095-0780.2012.03.003
Citation: LIU Wei, SU Shengyan, DONG Zaijie, ZHANG Jianqiao, MA Liangxiao, LI Lingling, QV Jiangqi, YUAN Xinhua. Correlation analysis of microsatellite DNA markers with growth trait among 3 breeding populations of common carp[J]. South China Fisheries Science, 2012, 8(3): 17-24. DOI: 10.3969/j.issn.2095-0780.2012.03.003
shu

Correlation analysis of microsatellite DNA markers with growth trait among 3 breeding populations of common carp

  • 1.

    Wuxi Fisheries College, Nanjing Agricultural University, Wuxi 214081, China

  • 2.

    Key Lab. of Freshwater Fisheries Research Center, Chinese Academy of Fishery Sciences, Wuxi 214081, China

  • 3.

    College of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, China

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  • Received Date: October 20, 2011
  • Revised Date: November 30, 2011
    Graphical Abstract
    • Abstract

  • We screened out the molecular makers of 15 microsatellite loci for common carp(Cyprinus carpio), and compared these markers with Huanghe carp (C.carpio haematopterusTemminck et Schlegel), Jian carp (C.carpio var. jian) and Heilongjiang carp (C.carpio haematopterus) populations in aspects of body weight, body length, body width and body depth. The results based on GLM show that Mfw5 is significantly correlated with body depth for Huanghe carp (P < 0.05). For Jian carp population, Hlj013, Cca09 and Mfw7 are significantly correlated with body weight, body length and body depth (P < 0.05); Mfw2 is significantly correlated with body weight and body width (P < 0.05); while Mfw29 is significantly correlated with body weight (P < 0.05). For Heilongjiang carp population, Mfw6 is significantly correlated with body weight, body length, body width and body depth (P < 0.05); Mfw4 is significantly correlated with body weight, body length and body depth (P < 0.05); Mfw11 is significantly correlated with body width and body depth (P < 0.05). Furthermore, the genes and genotypes related to growth traits in the 3 carp populations are found.

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  • [1]
    张义凤, 张研, 鲁翠云, 等. 鲤鱼微卫星标记与体重、体长和体高性状的相关分析[J]. 遗传, 2008, 30(5): 613-619. doi: 10.3321/j.issn:0253-9772.2008.05.014

    ZHANG Yifeng, ZHANG Yan, LU Cuiyun, et al. Correlation analysis of microsatellite DNA markers with body weight, length and height of common carp (Cyprinus carpio L. )[J]. Hereditas, 2008, 30(5): 613-619. (in Chinese) doi: 10.3321/j.issn:0253-9772.2008.05.014
    [2]
    张研, 梁利群, 常玉梅, 等. 鲤鱼体长性状的QTL定位及其遗传效应分析[J]. 遗传, 2007, 29(10): 1243-1248.

    ZHANG Yan, LIANG Liqun, CHANG Yumei, et al. Mapping and genetic effect analysis of quantitative trait loci related to body size in common carp (Cyprinus carpio L. )[J]. Hereditas, 2007, 29(10): 1243-1248. (in Chinese)
    [3]
    ALIAH R S, TAKAGI M, DONG S, et al. Isolation and inheritance of microsatellite markers in the common carp (Cyprinus carpio)[J]. Fish Sci, 1999, 65(2): 235-239. doi: 10.2331/fishsci.65.235
    [4]
    魏东旺, 楼允东, 孙效文, 等. 鲤鱼微卫星分子标记的筛选[J]. 动物学研究, 2001, 22(3): 238-241. doi: 10.3321/j.issn:0254-5853.2001.03.013

    WEI Dongwang, LOU Yundong, SUN Xiaowen, et al. Isolation of microsatellite markers in the common carp (Cyprinus carpio)[J]. Zool Res, 2001, 22(3): 238-241. (in Chinese) doi: 10.3321/j.issn:0254-5853.2001.03.013
    [5]
    YUE G H, HO M Y, ORBAN L, et al. Microsatellites within genes and ESTs of common carp and their applicability in silver crucian carp[J]. Aquaculture, 2004, 234(1): 85-98. doi: 10.1016/j.aquaculture.2003.12.021
    [6]
    SUN X W, LIANG L Q. A genetic linkage map of common carp (Cyprinus carpio L. ) and mapping of a locus associated with cold tolerance[J]. Aquaculture, 2005, 238(1): 165-172. doi: 10.1016/S0044-8486(03)00445-9
    [7]
    朱立静, 孙中响, 陈淑吟, 等. 磁珠富集法筛选西施舌微卫星序列[J]. 南方水产科学, 2011, 7(4): 10-15. doi: 10.3969/j.issn.2095-0780.2011.04.002

    ZHU Lijing, SUN Zhongxiang, CHEN Shuyin, et al. Microsatellite enrichment by magnetic beads in Coelomactra antiquate[J]. South China Fish Sci, 2011, 7(4): 10-15. (in Chinese) doi: 10.3969/j.issn.2095-0780.2011.04.002
    [8]
    LIU Z J, CORDES J F. DNA marker technologies and their applications in aquaculture genetics[J]. Aquaculture, 2004, 238(1/2/3/4): 1-37. doi: 10.1016/j.aquaculture.2004.05.027
    [9]
    孙效文, 梁利群. 鲤鱼的遗传连锁图谱(初报)[J]. 中国水产科学, 2000, 7(1): 1-5. doi: 10.3321/j.issn:1005-8737.2000.01.001

    SUN Xiaowen, LIANG Liqun. A genetic linkage map of common carp[J]. J Fish Sci China, 2000, 7(1): 1-5. (in Chinese) doi: 10.3321/j.issn:1005-8737.2000.01.001
    [10]
    梁利群, 孙效文. 鲤耐寒性状分子标记在遗传连锁图上的定位[J]. 大连水产学院学报, 2003, 18(4): 278-281. doi: 10.3969/j.issn.1000-9957.2003.04.009

    LIANG Liqun, SUN Xiaowen. Mapping cold tolerance strain on genetic linkage map of common carp[J]. J Dalian Fish Univ, 2003, 18(4): 278-281. (in Chinese) doi: 10.3969/j.issn.1000-9957.2003.04.009
    [11]
    徐云碧, 朱立煌. 分子数量遗传学[M]. 北京: 中国农业出版社, 1994: 114-260.

    XU Yunbi, ZHU Lihuang. Molecular quantitative genetics[M]. Beijing : China Agriculture Press, 1994: 114-260. (in Chinese)
    [12]
    全迎春, 孙效文, 梁利群. 应用微卫星多态分析四个鲤鱼群体的遗传多样性[J]. 动物学研究, 2005, 28(6): 595-602. doi: 10.3321/j.issn:0254-5853.2005.06.004

    QUAN Yingchun, SUN Xiaowen, LIANG Liqun, et al. Microsatellite variation among four breeding populations of common carps[J]. Zool Res, 2005, 28(6): 595-602. (in Chinese) doi: 10.3321/j.issn:0254-5853.2005.06.004
    [13]
    董在杰, 曲疆奇, 苏胜彦, 等. 运用TRAP标记分析5个鲤群体的遗传多样性[J]. 上海海洋大学学报, 2011, 20(2): 179-184. https://d.wanfangdata.com.cn/periodical/Ch9QZXJpb2RpY2FsQ0hJTmV3UzIwMjQxMTA1MTcxMzA0EhFzaHNjZHh4YjIwMTEwMjAwNBoIYnNrNnR6aTI%3D

    DONG Zaijie, QU Jiangqi, SU Shengyan, et al. Analysis of genetic diversity among five populations of Cyprinus carpio by TRAP markers[J]. J Shanghai Ocean Univ, 2011, 20(2): 179-184. (in Chinese) https://d.wanfangdata.com.cn/periodical/Ch9QZXJpb2RpY2FsQ0hJTmV3UzIwMjQxMTA1MTcxMzA0EhFzaHNjZHh4YjIwMTEwMjAwNBoIYnNrNnR6aTI%3D
    [14]
    LI Dayu, KANG Dahai, YIN Qianqian, et al. Microsatellite DNA marker analysis of genetic diversity in wild common carp(Cyprinus carpio L. ) populations[J]. J Genet Genomics, 2007, 34(11): 984-993. doi: 10.1016/S1673-8527(07)60111-8.
    [15]
    佟雪红, 董在杰, 缪为民, 等. 建鲤与黄河鲤的RAPD分子标记及其杂交优势的遗传分析[J]. 广东海洋大学学报, 2007, 27(1): 1-6. doi: 10.3969/j.issn.1673-9159.2007.01.001

    TONG Xuehong, DONG Zaijie, MIAO Weimin, et al. RAPD molecular markers between Jian carp and Huanghe carp and genetic analysis of heterosis[J]. J Guangdong Ocean Univ, 2007, 27(1): 1-6. (in Chinese) doi: 10.3969/j.issn.1673-9159.2007.01.001
    [16]
    王桂兴, 刘永新, 孙效文, 等. 牙鲆微卫星分子标记与生长性状的相关性分析[J]. 东北农业大学学报, 2009, 40(7): 77-84. doi: 10.3969/j.issn.1005-9369.2009.07.017

    WANG Guixing, LIU Yongxing, SUN Xiaowen, et al. Correlation analysis of microsatellite DNA marks with growth trait of Japanese flounder (Paralichthys olivaceu)[J]. J Northeast Agric Univ, 2009, 40(7): 77-84. (in Chinese) doi: 10.3969/j.issn.1005-9369.2009.07.017
    [17]
    李建林, 唐永凯, 俞菊华, 等. 吉富罗非鱼微卫星标记与体质量、体形性状相关性分析[J]. 中国水产科学, 2009, 16(6): 824-831. doi: 10.3321/j.issn:1005-8737.2009.06.003

    LI Jianlin, TANG Yongkai, YU Juhua, et al. Association analysis of microsatellite DNA markers with body weight and body shape in GIFT[J]. J Fish Sci China, 2009, 16(6): 824-831. (in Chinese) doi: 10.3321/j.issn:1005-8737.2009.06.003
    [18]
    DOMINIC W, REIICHIRO N, JENS K, et al. QTL analysis of behavioral and morphological differentiation between wild and laboratory zebrafish (Danio rerio)[J]. Behavior Genet, 2006, 36(2): 271-284. doi: 10.1007/s10519-005-9029-4.
    [19]
    孙效文, 贾瑞英, 魏东旺, 等. 磁珠富集法与小片段克隆法筛选鲤微卫星的比较研究[J]. 中国水产科学, 2005, 12(2): 126-132. doi: 10.3321/j.issn:1005-8737.2005.02.003

    SUN Xiaowen, JIA Ruiiying, WEI Dongwang, et al. Comparison between magnetic beads enriched and small inserted fragment library for microsatellite sequences of common carp[J]. J Fish Sci China, 2005, 12(2): 126-132. (in Chinese) doi: 10.3321/j.issn:1005-8737.2005.02.003
    [20]
    GEN H Y, MEI Y H, LASZLO O, et al. Microsatellites within genes and ESTs of common carp and their applicability in silver crucian carp[J]. Aquaculture, 2004, 234(1): 85-98. doi: 10.1016/j.aquaculture.2003.12.021
    [21]
    CROOIJMANS R P M A, BIERBOOMS V A F, KOMEN J, et al. Microsatellite markers in common carp (Cyprinus carpio L. )[J]. Anim Genet, 1997, 26(2): 129-134. doi: 10.1111/j.1365-2052.1997.00097.x
    [22]
    DAVID L, FANG J, PALANISAMY R, et al. Polymorphism in ornamental and common carp strains(Cyprinus carpio L. ) as revealed by AFLP analysis and a new set of microsatellite markers[J]. Mol Gen Genomics, 2001, 266(3): 353-362. doi: 10.1007/s004380100569.
    [23]
    王吉振, 王爱国, 储明星, 等. 二核酸微卫星PCR扩增的影子带及来源[J]. 畜牧兽医学报, 2007, 38(3): 241-246.

    WANG Jizhen, WANG Aiguo, CHU Mingxing, et al. Shadow bands in PCR amplification of dinucleotide microsatellites and their origin[J]. Acta Veterinaria et Zootechnica Sinica, 2007, 38(3): 241-246. (in Chinese)
    [24]
    刘继红, 张研, 常玉梅, 等. 鲤鱼(Cyprinus carpio L. )头长、眼径、眼间距QTL的定位[J]. 遗传, 2009, 31(5): 508-514. doi: 10.3724/SP.J.1005.2009.00508

    LIU Jihong, ZHANG Yan, CHANG Yumei, et al. Mapping QTLs related to head length, eye diameter and eye cross of common carp (Cyprinus carpio L. )[J]. Hereditas, 2009, 31(5): 508-514. (in Chinese) doi: 10.3724/SP.J.1005.2009.00508
    [25]
    赵海燕, 李池陶, 贾智英, 等. 德国镜鲤微卫星标记与形态性状的相关分析及亲本的选育[J]. 上海海洋大学学报, 2009, 18(5): 513-519. https://d.wanfangdata.com.cn/periodical/Ch9QZXJpb2RpY2FsQ0hJTmV3UzIwMjQxMTA1MTcxMzA0EhFzaHNjZHh4YjIwMDkwNTAwMRoIZ2d0djFxMW8%3D

    ZHAO Haiyan, LI Chitao, JIA Zhiying, et al. Correlation analysis of microsatellite DNA markers and morphological traits in Germanm mirror carp(Cyprinus carpio L. )[J]. J Shanghai Ocean Univ, 2009, 18(5): 513-519. (in Chinese) https://d.wanfangdata.com.cn/periodical/Ch9QZXJpb2RpY2FsQ0hJTmV3UzIwMjQxMTA1MTcxMzA0EhFzaHNjZHh4YjIwMDkwNTAwMRoIZ2d0djFxMW8%3D
    [26]
    朱健, 王建新. 建鲤品种特性研究进展[J]. 浙江海洋学院学报: 自然科学版, 2004, 23(1): 52-55.

    ZHU Jian, WANG Jianxin. Status of the studies on the characteristics of Jian carp, Cyprinus carpio var. jian[J]. J Zhejiang Ocean Univ: Natural Science, 2004, 23(1): 52-55. (in Chinese)
    [27]
    MARC J M R, HENK B, HANS K, et al. Genetic parameters for fillet traits and body measurements in Nile tilapia(Oreochromis niloticus L. )[J]. Aquaculture, 2005, 246(1): 125-132. doi: 10.1016/j.aquaculture.2005.01.006
    [28]
    REED D R, LAWLER M P, TORDOFF M G, et al. Reduced body mass is a common effect of gene knockout in mice[J]. BMC Genet, 2008, 9(4): 1-6.
    [29]
    GUIMARAES E P, RUANE J, SCHERF B D, et al. Marker-assisted selection: current status, and future perspectives in crops, livestock, forestry, and fish[M]. Rome: FAO, 2007: 310-328. https://www.researchgate.net/publication/263128388_Marker_assisted_selection_current_status_and_future_perspectives_in_crops_livestock_forestry_and_fish_FAO_Rome
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