Volume 4 Issue 6
Dec.  2008
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FU Yun, ZHONG Jinxiang, XIE Xiaoyong, YE Wei, LIN Bihai, CHEN Huichong, ZHANG Hanhua. Genetic diversity and specific AFLP bands in three cultured tilapia strains[J]. South China Fisheries Science, 2008, 4(6): 50-55.
Citation: FU Yun, ZHONG Jinxiang, XIE Xiaoyong, YE Wei, LIN Bihai, CHEN Huichong, ZHANG Hanhua. Genetic diversity and specific AFLP bands in three cultured tilapia strains[J]. South China Fisheries Science, 2008, 4(6): 50-55.
shu

Genetic diversity and specific AFLP bands in three cultured tilapia strains

  • 1.

    Guangdong National Elite Tilapia Farm, Guangzhou 511453, China

  • 2.

    Guangdong Provincial Fishery Technical Extension Center, Guangzhou 510222, China

  • 3.

    South China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Guangzhou 510300, China

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  • Received Date: June 15, 2008
  • Revised Date: September 02, 2008
    Graphical Abstract
    • Abstract

  • New Gift tilapia, GenoMar tilapia, and the hybrid tilapia of Oreochromis niloticus ♀ ×O.aureus ♂ were three major cultured tilapia lines in south China. Identifying these lines was important especially at fry stage. Using amplified fragment length polymorphism(AFLP)technique, we analyzed a total of 60 samples with five primer pairs. Out of 245 AFLP bands, 53.02% were polymorphic. Seven bands from primer pair E-ACA/M-CAT and two bands from E-ACA/M-CAG were found to be specific and could be used to distinguish the three cultured tilapia lines. As for genetic diversity of the three tilapia lines, gene diversity index of New Gift tilapia, GenoMar tilapia, and the hybrid were 0.1605, 0.1595, and 0.2214, respectively. Percent of polymorphic bands and Shannon index presented the similar trend in gene diversity index in these three lines, suggesting that New Gift tilapia was genetically stable, gene diversity index of GenoMar tilapia was a little small.

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    • References (24)
  • [1]
    VOS P, HOGERS R, BLEEKOR M, et al. AFLP a new technique for DNA fingerprinting[J]. Nucleic Res, 1995, 23(21): 4 407-4 414. doi: 10.1093/nar/23.21.4407
    [2]
    张俊彬, 黄良民, 陈真然. AFLP技术在笛鲷的仔鱼鉴定及其分类学上的研究[J]. 海洋学报, 2005, 27(2): 165-171. doi: 10.3321/j.issn:0253-4193.2005.02.022
    [3]
    王志勇, 邱淑贞. 福建官井洋大黄鱼AFLP指纹多态性的研究[J]. 中国水产科学, 2002, 9(3): 198-202. doi: 10.3321/j.issn:1005-8737.2002.03.002
    [4]
    宋君, 宋昭彬, 岳碧松, 等. 长江合江江段岩原鲤种群遗传多样性的AFLP分析[J]. 四川动物, 2005, 24(4): 495-499. doi: 10.3969/j.issn.1000-7083.2005.04.013
    [5]
    LIU Y G, CHEN S L, LI B F, et al. Analysis of genetic variation in selected stocks of hatchery flounder, Paralichthys olivaceus, using AFLP markers[J]. Biochem Systematics Ecol, 2005, 33(10): 993-1 005. doi: 10.1016/j.bse.2005.02.008
    [6]
    FELIP A, MARTINEZ-RODRIGUEZ G, PIFERRER F, et al. AFLP analysis confirms exclusive maternal genomic contribution of meiogynogenetic sea bass (Dicentrarchus labrax L. )[J]. Mar Biotechnol, 2000, 2(3): 301-306. doi: 10.1007/s101260000000
    [7]
    SIMMONS M, MICKETT K, KUCUKTAS H, et al. Comparison of domestic and wild channel catfish (Ictalurus punctatus) populations provides no evidence for genetic impact[J]. Aquac, 2006, 252(2/4): 133-146. doi: 10.1016/j.aquaculture.2005.11.006
    [8]
    KIDD M R, KIDD C E, KOCHER T D. Axes of differentiation in the bower-building cichlids of Lake Malawi[J]. Mol Ecol, 2006, 15 (2): 459-478. doi: 10.1111/j.1365-294X.2005.02787.x
    [9]
    LIU Z J, KARSI A, LI P, et al. An AFLP-based genetic linkage map of channel catfish (Ictalurus punctatus) constructed by using an interspecific hybrid resource family[J]. Genet, 2003, 165(2): 687-694. doi: 10.1093/genetics/165.2.687
    [10]
    NICHOLS K M, YOUNG W P, DANZMANN R G, et al. A consolidated linkage map for rainbow trout (Oncorhynchus mykiss)[J]. Anim Genet, 2003, 34(2): 102-115. doi: 10.1046/j.1365-2052.2003.00957.x
    [11]
    ZIMMERMAN A M, WHEELER P A, RISTOW S S, et al. Composite interval mapping reveals three QTL associated with pyloric caeca number in rainbow trout, Oncorhynchus mykiss[J]. Aquac, 2005, 247(1/4): 85-95. doi: 10.1016/j.aquaculture.2005.02.029
    [12]
    FELIP A, YOUNG W P, WHEELER P A, et al. An AFLP-based approach for the identification of sex-linked markers in rainbow trout (Oncorhynchus mykiss)[J]. Aquac, 2005, 247(1/4): 35-43. doi: 10.1016/j.aquaculture.2005.02.014
    [13]
    AGRESTI J J, SEKI S, CNAANI A, et al. Breeding new strains of tilapia: development of an artificial center of origin and linkage map based on AFLP and microsatellite loci[J]. Aquac, 2000, 185(1/2): 43-56. doi: 10.1016/S0044-8486(99)00335-X
    [14]
    KOCHER T D, LEE W J, SOBOLEWSKA H, et al. A genetic linkage map of a cichlid fish, the tilapia (Oreochromis niloticus)[J]. Genet, 1998, 148: 1 225-1 232. doi: 10.1093/genetics/148.3.1225
    [15]
    EZAZ M T, HARVEY S C, BOONPHAKDEE C, et al. Isolation and physical mapping of sex-linked AFLP markers in Nile tilapia (Oreochromis niloticus L. ) [J]. Mar Biotechnol, 2004, 6(5): 435-445. doi: 10.1007/s10126-004-3004-6
    [16]
    MOEN T, AGRESTI J J, CNAANI A, et al. A genome scan of a four-way tilapia cross supports the existence of a quantitative trait locus for cold tolerance on linkage group 23[J]. Aquac Res, 2004, 35(9): 893-904. doi: 10.1111/j.1365-2109.2004.01082.x
    [17]
    EZAZ M T, SAYEED S, MCANDREW B J. Use of microsatellite loci and AFLP markers to verify gynogenesis and clonal lines in Nile tilapia Oreochromis niloticus L[J]. Aquac Res, 2004, 35(15): 1 472-1 481. doi: 10.1111/j.1365-2109.2004.01175.x
    [18]
    SAMBROOK J, RUSSELL D W. 分子克隆实验指南[M]. 黄培堂, 金冬雁, 黎孟枫, 等译. 3版. 北京: 科学出版社, 2002: 8.
    [19]
    YEH J C, YANG R, BOYLE T. POPGENE Version 1.31: Microsoft window-based freeware for population genetic analysis[CP]. Edmonton: University of Alberta, 1999. https://xueshu.baidu.com/usercenter/paper/show?paperid=c557481ab723709e6c234f982a00ef01&site=xueshu_se&hitarticle=1
    [20]
    李家乐, 李思发. 中国大陆尼罗罗非鱼引进及其研究进展[J]. 水产学报, 2001, 25(1): 90-95. https://kns.cnki.net/kcms2/article/abstract?v=-xbefZa1Cds5tp2U81CAC6sASIMGSurfJ8bu3siyJcruwBSjchsMx7i7hJVdAhhNn3ecClppqTVfYdRuexeztJ7HcO33SC19EXVy1_dkpTTlEnOGyoepr7xFdO6jwFK46dI7itK6OxeFib_9hEUPV-NHxxZgcJ8lz_qR7uN18y06J-nuFE6T3HhoT2AsqZvl&uniplatform=NZKPT&language=CHS
    [21]
    张军丽, 王峥峰, 李鸣光, 等. 鹤山人工林大叶相思种群遗传结构的AFLP分析[J]. 应用生态学报, 2001, 12(4): 491. https://kns.cnki.net/kcms2/article/abstract?v=-xbefZa1Cdub3otL3-nAqvwk07NhgB_qaJki9ja1zMk9yAh5DYiHeC6d3rRG88xDPYZJuYCj7RE6RD72rJGXTBo0OU5sdGY5A1yIx6EU0EnJFYdX1_HLUycjkzlG4rbAWdiR37rQAwNg6DtJMdwHoYDzc4lvWQ2vH60VoXvMP9BL7vacXycPLG9z77OnqbjN&uniplatform=NZKPT&language=CHS
    [22]
    李思发, 蔡完其. 我国尼罗罗非鱼和奥利亚罗非鱼养殖群体的遗传渐渗[J]. 水产学报, 1995, 19(2): 105-111. https://kns.cnki.net/kcms2/article/abstract?v=-xbefZa1CdtNgFunpXtbnWriHTDiTVnfGR44us5kdzqF2EHIpNRyTf6n4g_gbYj-lun6QpQFB4K-dkVYJgiqfGik0gZsR4NFBC3NMUIE-ASmn17QKpmiUnEICh893HRiGK-y5WS2GaRWOfihYNcVg6IZ923hrCdYawdSWRhsPuPRROF0QCj0zU9Iak3Rsi2Y&uniplatform=NZKPT&language=CHS
    [23]
    颉晓勇. 新吉富罗非鱼选育过程中遗传变异的跟踪分析[D]. 上海: 上海水产大学, 2006. https://kns.cnki.net/kcms2/article/abstract?v=-xbefZa1CdtGBTJek9EjQAfVv5Xz6DfTlRHpbLyTMyIhpymOdxxyfIxkQe6AgmNmH16jJSXfFeQlZcJ5ixyzQHSKXhSKp5UpxHGnPga5vyE5T8QaBVvsDTgORNbizxXLRQ8BYnxBj0aCHMoisSN4aaIk_PZZO4j23-FAkZtnqfk9NJ0_rfbkgcPsQ4bwyIuS&uniplatform=NZKPT&language=CHS
    [24]
    李莉好, 喻达辉, 黄桂菊, 等. 吉富罗非鱼不同选育群体的遗传多样性[J]. 南方水产, 2007, 3(5): 40-48. doi: 10.3969/j.issn.2095-0780.2007.05.007
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