Volume 11 Issue 6
Dec.  2015
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LI Xuguang, QI Zhanhui, LIN Lin, ZHANG Zhe, HUANG Honghui. Preliminary study on archaeal community in sediment of Dapeng Cove using high-throughput sequencing[J]. South China Fisheries Science, 2015, 11(6): 1-8. DOI: 10.3969/j.issn.2095-0780.2015.06.001
Citation: LI Xuguang, QI Zhanhui, LIN Lin, ZHANG Zhe, HUANG Honghui. Preliminary study on archaeal community in sediment of Dapeng Cove using high-throughput sequencing[J]. South China Fisheries Science, 2015, 11(6): 1-8. DOI: 10.3969/j.issn.2095-0780.2015.06.001
shu

Preliminary study on archaeal community in sediment of Dapeng Cove using high-throughput sequencing

  • 1.

    Guangdong Provincial Key Lab. of Fishery Ecology and Environment; Key Lab. of South China Sea Fishery Resources Exploitation & Utilization, Ministry of Agriculture; South China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Guangzhou 510300, China

  • 2.

    College of Fisheries and Life Science, Shanghai Ocean University, Shanghai 201306, China

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  • Received Date: January 25, 2015
  • Revised Date: February 13, 2015
    Graphical Abstract
    • Abstract

  • We analyzed the archaeal community in tropical aquaculture farm sediments in Dapeng Cove, located in the southwest of Daya Bay, southern China. Sediment cores samples (5 cm and 30 cm in depth) were collected by a core-sampler in summer (August, 2014). Results show that the abundance of archaea in deep layers was higher than that in surface layer. The dominant species in surface and deep layers were Class Thermoplasma, Phylum Euryarchaeota, and Class MCG (Miscellaneous Crenarchaeotic Group), Phylum Crenarchaeota. In general, the abundance of Crenarchaeota was higher than that of Euryarchaeota. The abundance of predominant species was higher in aquaculture farms than in non-aquaculture area. The difference in archaeal community structure between surface and deep layers was more significant in aquaculture farms than that in non-aquaculture area. Results indicate that the archaeal community structure might be affected by intensive aquaculture activities, whose underlying mechanism needs further study.

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    • References (36)
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