15株鱼源致病性鰤鱼诺卡氏菌的聚类分析

Cluster analysis on 15 strains of pathogenic Nocardia seriolae from fish

  • 摘要: 文章对2006年~2012年从华南地区采样或送检的患结节病的鱼类(8个鱼种)样品中分离到的15个病原菌株进行了系统发育和聚类分析。系统发育分析结果显示,所有供试菌的16S rDNA序列均与鰤鱼诺卡氏菌(Nocardia seriolae)聚为一支,同源性为99%,且明显地分为2个类群;聚类结果显示,15个菌株在T=23时可分为2个组群,在T=11时2个组群,分别可分为2个和4个亚群。研究结果显示15株鰤鱼诺卡氏菌存在多样性。

     

    Abstract: Using phylogenetic and cluster analysis, we studied 15 strains of bacteria isolated from eight species of South China sampling andinspected fish that were suffering from sarcoidosis. Phylogenetic analysis indicates that the 16S rDNA sequences of 15 isolated strains, which share 99% similarity to that of Nocardia seriolae, have a close evolutionary relationship with the member of the N.seriolae, and could be grouped into 2 clusers. Cluster analysis shows that 15 isolated strains could be divided into two groups when T=23, which could be divided into two and four subgroups respectively when T=11. The results suggest that diversity exists in the 15 strains of N. seriolae.

     

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