致病性溶藻弧菌TaqMan探针qPCR检测方法的建立与应用

Establishment and application of a TaqMan probe-based qPCR assay for detection of pathogenic Vibrio alginolyticus

  • 摘要: 溶藻弧菌 (Vibrio alginolyticus) 是危害海水养殖动物鱼虾贝类的重要致病菌,为实现对该致病菌的快速精准检测,本研究建立了一种基于TaqMan探针的qPCR方法。以溶藻弧菌vopS基因保守序列设计特异性引物与TaqMan探针,优化反应体系及扩增条件,构建标准曲线,系统评估该方法的特异性、灵敏度及重复性。结果显示,该方法对溶藻弧菌特异性良好,与其他水产病原菌无交叉反应;最低检测限达1 拷贝·μL−1;标准曲线相关系数为0.999 2,扩增效率为105%;重复性试验组内与组间变异系数 (CV) 均低于5%,说明该方法稳定性良好。采用临床样本验证,该方法可精准检出水样、组织样品中的溶藻弧菌。综上,本研究建立的TaqMan探针qPCR方法特异性强、灵敏度高、重复性佳,可为溶藻弧菌的精准检测提供技术支撑。

     

    Abstract: Vibrio alginolyticus is a major pathogenic bacterium that severely infects farmed marine aquatic animals, including fish, shrimp and shellfish. To achieve rapid and accurate detection of this pathogen, a TaqMan probe-based quantitative PCR (qPCR) assay was developed in this study. Specific primers and a TaqMan probe were designed targeting the conserved region of the vopS gene of V. alginolyticus. The reaction system and amplification conditions were optimized, and the specificity, sensitivity and reproducibility of the assay were evaluated using a plasmid standard curve. The results showed that the assay is highly specific for V. alginolyticus with no cross-reactivity with other aquatic pathogenic bacteria. The limit of detection was 1 copy·μL−1. The standard curve showed a correlation coefficient (r2) of 0.999 2 and an amplification efficiency of 105%. Both intra-assay and inter-assay coefficients of variation (CVs) were below 5%, indicating good stability and reproducibility. Furthermore, the assay successfully detected V. alginolyticus aquaculture water and oyster tissue samples. In conclusion, the TaqMan qPCR assay established in this study is specific, sensitive, and reproducible, and provides a reliable tool for the rapid and accurate detection of V. alginolyticus.

     

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